SMTL ID : 4rqa.1 (1 other biounit)

Crystal Structure of a Hypoxanthine Phosphoribosyltransferase (target ID NYSGRC-029686) from Staphylococcus aureus (orthorhombic space group)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.48 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: E.19, Q.23, D.57, K.60, R.61 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.19, A:D.57, A:K.60, A:R.61 Water bridges: A:Q.23 GOL.2: 4 residues within 4Å: Chain A: E.28, L.29, V.150, G.151 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.28, A:V.150, A:G.151 Water bridges: A:V.150

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: S.56, D.57, K.60 Ligands: CL.7 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.60, A:K.60

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.4: 5 residues within 4Å: Chain A: L.48, K.49, G.50, D.165, R.171 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:K.49 Hydrogen bonds: A:L.48, A:K.49, A:G.50 Water bridges: A:S.51, A:D.165, A:R.171 Salt bridges: A:R.171

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 4 residues within 4Å: Chain A: E.109, K.137, F.158, V.159 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: L.42, S.67, K.99 Ligand excluded by PLIP CL.7: 4 residues within 4Å: Chain A: M.53, D.57, Y.162 Ligands: NA.3 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ghosh, A. et al., Crystal Structure of a Hypoxanthine Phosphoribosyltransferase (target ID NYSGRC-029686) from Staphylococcus aureus (orthorhombic space group). To be Published

Release Date

2014-11-26

Peptides

Hypoxanthine phosphoribosyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hypoxanthine phosphoribosyltransferase

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