SMTL ID : 4rsy.1

Crystal structures of the Human leukotriene A4 Hydrolase complex with a potential inhibitor H7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

monomer

Ligands

1 x B3N: 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide(Non-covalent)

B3N.1: 19 residues within 4Å: Chain A: Q.155, Q.157, A.158, Y.288, G.290, E.292, H.316, E.317, H.320, W.332, F.335, E.339, V.388, L.390, P.395, A.398, Y.399, Y.404 Ligands: ZN.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.288, A:Y.288, A:W.332, A:F.335, A:P.395, A:Y.399 Hydrogen bonds: A:Q.157, A:G.290 Water bridges: A:G.290, A:D.396, A:D.396 pi-Stacking: A:F.335

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain A: H.316, H.320, E.339, Y.404 Ligands: B3N.1 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.320, A:E.339, A:E.339

1 x YB: YTTERBIUM (III) ION(Non-covalent)

YB.3: 2 residues within 4Å: Chain A: D.68 Ligands: ACY.4 5 PLIP interactions: 2 interactions with chain A, 1 Ligand-Ligand interactions, 2 Ligand-Water interactions Metal complexes: A:D.68, A:D.68, ACY.4, H2O.5, H2O.5

1 x ACY: ACETIC ACID(Non-functional Binders)

ACY.4: 3 residues within 4Å: Chain A: D.68, N.69 Ligands: YB.3 No protein-ligand interaction detected (PLIP)

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.5: 8 residues within 4Å: Chain A: G.365, G.368, E.369, N.372, E.522, A.525, Q.526, Q.529 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.369, A:Q.526, A:Q.529

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ouyang, P. et al., Structure of Human Leukotriene A4 Hydrolase in complex with inhibitor H1. To be Published

Release Date

2015-12-02

Peptides

Leukotriene A-4 hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Leukotriene A-4 hydrolase

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