- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x IMP: INOSINIC ACID(Non-covalent)
- 4 x I13: 1-(2-{3-[(1E)-N-(2-aminoethoxy)ethanimidoyl]phenyl}propan-2-yl)-3-(4-chloro-3-nitrophenyl)urea(Non-covalent)
I13.2: 17 residues within 4Å:- Chain A: S.125, A.126, H.127, N.152, G.173, T.182, M.263, G.264, M.269, V.288, E.290
- Chain D: L.28, P.29, S.315, G.318, Y.319
- Ligands: IMP.1
12 PLIP interactions:8 interactions with chain A, 4 interactions with chain D- Hydrogen bonds: A:G.173, A:E.290, A:E.290
- Water bridges: A:N.152, A:G.175, A:T.182, A:T.182, A:T.182, D:S.315, D:S.315
- Hydrophobic interactions: D:P.29, D:Y.319
I13.6: 18 residues within 4Å:- Chain A: L.28, P.29, S.315, G.318, Y.319
- Chain B: S.125, A.126, H.127, N.152, G.173, T.182, M.263, G.264, M.269, V.288, E.290
- Ligands: IMP.5, PEG.8
11 PLIP interactions:4 interactions with chain A, 7 interactions with chain B- Hydrophobic interactions: A:P.29, A:Y.319
- Water bridges: A:S.315, A:S.315, B:N.152, B:G.175, B:T.182, B:T.182
- Hydrogen bonds: B:G.173, B:E.290, B:E.290
I13.9: 16 residues within 4Å:- Chain B: P.29, S.315, G.318, Y.319
- Chain C: S.125, A.126, H.127, N.152, G.173, T.182, M.263, G.264, M.269, V.288, E.290
- Ligands: IMP.10
13 PLIP interactions:9 interactions with chain C, 4 interactions with chain B- Hydrophobic interactions: C:A.126, B:P.29, B:Y.319
- Hydrogen bonds: C:G.173, C:E.290, C:E.290
- Water bridges: C:N.152, C:G.175, C:G.175, C:E.290, C:E.290, B:S.25, B:V.27
I13.12: 16 residues within 4Å:- Chain C: L.28, P.29, S.315, G.318, Y.319
- Chain D: A.126, H.127, N.152, G.173, T.182, M.263, G.264, M.269, V.288, E.290
- Ligands: IMP.13
16 PLIP interactions:12 interactions with chain D, 4 interactions with chain C- Hydrophobic interactions: D:E.290, C:P.29, C:Y.319
- Hydrogen bonds: D:N.152, D:G.173, D:E.290, D:E.290
- Water bridges: D:A.126, D:G.175, D:G.175, D:T.182, D:T.182, D:E.290, D:E.290, C:S.25, C:V.27
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 4 residues within 4Å:- Chain A: N.41, D.119, I.146, D.147
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.147, A:D.147
GOL.7: 5 residues within 4Å:- Chain B: N.41, V.118, D.119, I.146, D.147
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:N.41, B:D.147, B:D.147
GOL.11: 4 residues within 4Å:- Chain C: N.41, D.119, I.146, D.147
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:N.41, C:D.147, C:D.147, C:D.147
GOL.14: 4 residues within 4Å:- Chain D: N.23, K.330, K.331, S.332
No protein-ligand interaction detected (PLIP)- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Structure of Cryptosporidium IMP dehydrogenase bound to an inhibitor with in vivo antiparasitic activity. Acta Crystallogr F Struct Biol Commun (2015)
- Release Date
- 2014-12-31
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x IMP: INOSINIC ACID(Non-covalent)
- 4 x I13: 1-(2-{3-[(1E)-N-(2-aminoethoxy)ethanimidoyl]phenyl}propan-2-yl)-3-(4-chloro-3-nitrophenyl)urea(Non-covalent)
- 4 x GOL: GLYCEROL(Non-functional Binders)
- 2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Structure of Cryptosporidium IMP dehydrogenase bound to an inhibitor with in vivo antiparasitic activity. Acta Crystallogr F Struct Biol Commun (2015)
- Release Date
- 2014-12-31
- Peptides
- Inosine-5'-monophosphate dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D