SMTL ID : 4rwa.1 (1 other biounit)

Synchrotron structure of the human delta opioid receptor in complex with a bifunctional peptide (PSI community target)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.28 Å

Oligo State

monomer

Ligands

1 x DI7- DI8- PHE- PHE- NH2: bifunctional peptide(Non-covalent)

DI7-DI8-PHE-PHE-NH2.1: 12 residues within 4Å: Chain A: L.198, D.201, Y.202, M.205, M.272, L.273, V.290, I.350, V.354, W.357, I.377, Y.381 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.198, A:D.201, A:I.350, A:V.354 Hydrogen bonds: A:D.201, A:L.273 pi-Stacking: A:W.357

1 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate(Non-covalent)

OLC.2: 7 residues within 4Å: Chain A: F.210, M.214, I.241, C.244, I.245, F.293, P.298 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.210, A:F.210, A:P.298

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fenalti, G. et al., Structural basis for bifunctional peptide recognition at human delta-opioid receptor. Nat.Struct.Mol.Biol. (2015)

Release Date

2015-01-14

Peptides

Soluble cytochrome b562,Delta-type opioid receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Soluble cytochrome b562,Delta-type opioid receptor

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