SMTL ID : 4rwf.1

Crystal structure of the CLR:RAMP2 extracellular domain heterodimer with bound adrenomedullin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 15 residues within 4Å: Chain A: N.14, D.16, K.17, W.64, A.65, D.67, R.68, E.113, E.155, P.156, Y.157, F.158, W.232, M.332, W.342 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:W.64, A:R.68, A:R.68, A:Y.157

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: D.365, N.369, T.415, D.418, C.419 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.369, A:D.418 EDO.3: 8 residues within 4Å: Chain A: G.15, D.16, K.17, G.18, Y.19, N.20, D.298, K.299 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.15, A:D.298, A:K.299 EDO.4: 6 residues within 4Å: Chain A: Q.74, P.336, Q.337, A.340, E.373, F.374 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.74, A:Q.337, A:E.373, A:E.373 EDO.5: 3 residues within 4Å: Chain A: T.484, A.485, E.488 2 PLIP interactions: 2 interactions with chain A Water bridges: A:K.481, A:T.484 EDO.6: 3 residues within 4Å: Chain A: Q.455, E.488, K.492 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.455, A:E.488

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Booe, J.M. et al., Structural Basis for Receptor Activity-Modifying Protein-Dependent Selective Peptide Recognition by a G Protein-Coupled Receptor. Mol.Cell (2015)

Release Date

2015-05-20

Peptides

Maltose transporter subunit, Receptor activity-modifying protein 2, Calcitonin gene-related peptide type 1 receptor fusion protein: A
Adrenomedullin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Maltose transporter subunit, Receptor activity-modifying protein 2, Calcitonin gene-related peptide type 1 receptor fusion protein

Adrenomedullin

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