SMTL ID : 4rx9.1

SYK Catalytic Domain Complexed with a Potent Pyrimidine Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: N.172, S.198, K.200, V.261 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.172, A:S.198, A:S.198 Water bridges: A:K.200

1 x 3YT: 2-{[(1R,2S)-2-aminocyclohexyl]amino}-4-{[3-(2H-1,2,3-triazol-2-yl)phenyl]amino}pyrimidine-5-carboxamide(Non-covalent)

3YT.2: 16 residues within 4Å: Chain A: L.25, G.26, A.48, K.50, V.81, M.96, E.97, M.98, A.99, G.102, P.103, R.146, N.147, L.149, S.159, D.160 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.48, A:P.103, A:L.149 Hydrogen bonds: A:E.97, A:A.99, A:R.146, A:D.160 Water bridges: A:N.147, A:D.160

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thoma, G. et al., Discovery and profiling of a selective and efficacious syk inhibitor. J.Med.Chem. (2015)

Release Date

2015-03-18

Peptides

Tyrosine-protein kinase SYK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase SYK