SMTL ID : 4ry8.2 (1 other biounit)

Crystal structure of 5-methylthioribose transporter solute binding protein TLET_1677 from Thermotoga lettingae TMO TARGET EFI-511109 in complex with 5-methylthioribose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-dimer

Ligands

2 x SR1: 5-S-methyl-5-thio-alpha-D-ribofuranose(Non-covalent)

SR1.1: 11 residues within 4Å: Chain A: F.29, F.30, H.79, D.103, Q.116, F.147, P.149, R.153, M.204, W.205, D.231 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:D.103, A:D.103, A:Q.116, A:R.153, A:R.153, A:M.204 Water bridges: A:Q.116, A:T.253 Salt bridges: A:H.79, A:R.153 SR1.2: 11 residues within 4Å: Chain B: F.29, F.30, H.79, D.103, Q.116, F.147, P.149, R.153, M.204, W.205, D.231 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:D.103, B:D.103, B:Q.116, B:R.153, B:R.153, B:M.204 Salt bridges: B:H.79, B:R.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patskovsky, Y. et al., Crystal structure of 5-methylthioribose binding protein TLET_1677 from Thermotoga lettingae TARGET EFI-511109. To be Published

Release Date

2014-12-24

Peptides

Periplasmic binding protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Periplasmic binding protein

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