SMTL ID : 4s1t.2 (1 other biounit)

Crystal structure of the mutant I26A/N52A of the endoribonuclease from human coronavirus 229E

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-hexamer

Ligands

6 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: H.236, H.251, K.292, T.343, Y.345 5 PLIP interactions: 5 interactions with chain A Water bridges: A:G.249, A:G.249, A:G.249 Salt bridges: A:H.251, A:K.292 PO4.2: 5 residues within 4Å: Chain B: H.236, H.251, K.292, T.343, Y.345 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.249 Water bridges: B:L.247 Salt bridges: B:H.236, B:H.251, B:K.292 PO4.3: 5 residues within 4Å: Chain C: H.236, G.249, H.251, K.292, T.343 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:G.249 Water bridges: C:K.292, C:T.296 Salt bridges: C:H.236, C:H.251, C:K.292 PO4.4: 5 residues within 4Å: Chain D: H.236, H.251, K.292, T.343, Y.345 5 PLIP interactions: 5 interactions with chain D Water bridges: D:G.249, D:G.249, D:G.249 Salt bridges: D:H.251, D:K.292 PO4.5: 5 residues within 4Å: Chain E: H.236, H.251, K.292, T.343, Y.345 5 PLIP interactions: 5 interactions with chain E Hydrogen bonds: E:G.249 Water bridges: E:L.247 Salt bridges: E:H.236, E:H.251, E:K.292 PO4.6: 5 residues within 4Å: Chain F: H.236, G.249, H.251, K.292, T.343 6 PLIP interactions: 6 interactions with chain F Hydrogen bonds: F:G.249 Water bridges: F:K.292, F:T.296 Salt bridges: F:H.236, F:H.251, F:K.292

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huo, T. et al., Crystal structure and mutational analysis of the endoribonuclease from human coronavirus 229E. To be Published

Release Date

2016-01-20

Peptides

Uridylate-specific endoribonuclease: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
E

D
C

E
D

F
E

Uridylate-specific endoribonuclease

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