SMTL ID : 4tpt.1

Crystal Structure of the Human LIMK2 Kinase Domain In Complex With a Non-ATP Competitive Inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x 35H: N-{4-[(1S)-1,2-dihydroxyethyl]benzyl}-N-methyl-4-(phenylsulfamoyl)benzamide(Non-covalent)

35H.1: 19 residues within 4Å: Chain A: K.31, E.32, L.33, I.34, M.51, L.54, V.59, L.60, F.62, L.74, T.76, L.113, H.120, V.138, A.139, D.140, F.141, L.143, R.145 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:K.31, A:V.59, A:L.74, A:L.113, A:D.140, A:L.143, A:L.143, A:R.145 Hydrogen bonds: A:I.34, A:I.34, A:D.140, A:R.145 pi-Cation interactions: A:K.31 35H.2: 19 residues within 4Å: Chain B: K.31, E.32, L.33, I.34, M.51, L.54, V.59, L.60, F.62, L.74, T.76, L.113, H.120, V.138, A.139, D.140, F.141, L.143, R.145 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:K.31, B:K.31, B:V.59, B:L.74, B:T.76, B:L.113, B:D.140, B:L.143, B:L.143 Hydrogen bonds: B:K.31, B:I.34, B:I.34, B:D.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goodwin, N.C. et al., Discovery of a Type III Inhibitor of LIM Kinase 2 That Binds in a DFG-Out Conformation. Acs Med.Chem.Lett. (2015)

Release Date

2014-10-22

Peptides

LIM domain kinase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

LIM domain kinase 2

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