SMTL ID : 4trr.1 (1 other biounit)

Crystal structure of a putative Putative D-beta-hydroxybutyrate dehydrogenase from Burkholderia cenocepacia J2315

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-tetramer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: S.24, G.25, I.26, G.27, N.98, G.100 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:I.26, A:G.27, A:N.98 Water bridges: A:N.98, A:A.99, A:G.100 SO4.3: 6 residues within 4Å: Chain B: S.24, G.25, I.26, G.27, N.98, G.100 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.21, B:I.26, B:G.27, B:N.98 Water bridges: B:S.24 SO4.4: 6 residues within 4Å: Chain C: S.24, G.25, I.26, G.27, N.98, G.100 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:I.26, C:G.27, C:N.98, C:N.98 SO4.6: 6 residues within 4Å: Chain D: S.24, G.25, I.26, G.27, N.98, G.100 4 PLIP interactions: 4 interactions with chain D Hydrogen bonds: D:I.26, D:G.27, D:N.98 Water bridges: D:A.99

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: Q.119, V.123 Chain B: Q.119, V.123 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.119, B:Q.119 EDO.5: 4 residues within 4Å: Chain C: Q.119, V.123 Chain D: Q.119, V.123 2 PLIP interactions: 1 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:Q.119, D:Q.119 EDO.7: 2 residues within 4Å: Chain D: L.46, K.117 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:K.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seattle Structural Genomics Center for Infectious Disease (SSGCID) et al., Crystal structure of a putative Putative D-beta-hydroxybutyrate dehydrogenase from Burkholderia cenocepacia J2315. to be published

Release Date

2014-08-06

Peptides

Putative D-beta-hydroxybutyrate dehydrogenase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Putative D-beta-hydroxybutyrate dehydrogenase

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