SMTL ID : 4trz.2 (2 other biounits)

Structure of BACE1 complex with 2-thiophenyl HEA-type inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.25 Å

Oligo State

monomer

Ligands

1 x GLU- ILE- TIH- TVA: 2-thiophenyl HEA-type inhibitor(Non-covalent)

GLU-ILE-TIH-TVA.1: 26 residues within 4Å: Chain A: S.12, G.13, Q.14, G.15, L.32, D.34, G.36, S.37, Y.73, T.74, Q.75, F.110, I.112, W.117, I.120, Y.200, I.228, D.230, G.232, T.233, T.234, N.235, R.237, R.309, T.331, V.334 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:L.32, A:Q.75, A:I.112, A:Y.200, A:Y.200, A:I.228, A:T.234 Hydrogen bonds: A:D.34, A:T.74, A:Q.75, A:D.230, A:T.234, A:T.234, A:T.234, A:N.235 Salt bridges: A:R.309, A:K.323 pi-Stacking: A:Y.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hattori, Y. et al., Evaluation of transition-state mimics in a superior BACE1 cleavage sequence as peptide-mimetic BACE1 inhibitors. Bioorg.Med.Chem. (2015)

Release Date

2015-07-01

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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