SMTL ID : 4tz9.1

Structure of Metallo-beta-lactamase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.81, H.83, H.150 Ligands: CD.4 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.81, A:H.83, A:H.150, H2O.1

1 x CO: COBALT (II) ION(Non-covalent)

CO.2: 3 residues within 4Å: Chain A: N.56, G.88, D.91 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.91, H2O.2

4 x NI: NICKEL (II) ION(Non-covalent)

NI.3: 1 residues within 4Å: Chain A: H.189 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.189, H2O.3 NI.5: 1 residues within 4Å: Chain A: H.120 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.120 NI.6: 1 residues within 4Å: Chain A: H.222 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:H.222, H2O.3, H2O.4, H2O.4, H2O.4 NI.7: 1 residues within 4Å: Chain A: E.131 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.131, A:E.131

1 x CD: CADMIUM ION(Non-covalent)

CD.4: 4 residues within 4Å: Chain A: D.85, C.169, H.211 Ligands: ZN.1 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.85, A:C.169, A:H.211, H2O.1, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ferguson, J.A. et al., Structure of Metallo-beta-lactamase. To Be Published

Release Date

2015-07-29

Peptides

Class B metallo-beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Class B metallo-beta-lactamase