SMTL ID : 4u09.1 (1 other biounit)

Structure of Leptospira interrogans LRR protein LIC12759

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: E.347, E.370 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.347, A:E.370, A:E.370 ZN.2: 1 residues within 4Å: Chain A: H.281 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.281 ZN.3: 1 residues within 4Å: Chain A: E.235 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.235, A:E.235 ZN.4: 1 residues within 4Å: Chain A: H.166 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.166, H2O.3

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.5: 6 residues within 4Å: Chain A: K.6, P.7, Y.8, K.9, N.10, K.13 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.9, A:N.10 pi-Cation interactions: A:Y.8

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.6: 2 residues within 4Å: Chain A: Y.280 Ligands: PEG.7 3 PLIP interactions: 3 interactions with chain A Water bridges: A:Y.280, A:Y.280, A:Y.280

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.7: 8 residues within 4Å: Chain A: Y.276, Y.280, H.301, L.302, S.303, W.322, S.324 Ligands: SO4.6 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.303, A:S.324 Water bridges: A:Y.276, A:H.301

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miras, I. et al., Structural characterization of a novel subfamily of leucine-rich repeat proteins from the human pathogen Leptospira interrogans. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-06-03

Peptides

LIC12759: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LIC12759

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