SMTL ID : 4u21.1

GluA2flip sLBD complexed with FW and (R,R)-2b crystal form E

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.39 Å

Oligo State

homo-dimer

Ligands

2 x FWD: 2-AMINO-3-(5-FLUORO-2,4-DIOXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-PROPIONIC ACID(Non-covalent)

FWD.1: 15 residues within 4Å: Chain A: E.12, Y.60, P.88, L.89, T.90, R.95, L.137, G.140, S.141, T.142, T.173, L.191, E.192, M.195, Y.219 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:P.88, A:T.90, A:S.141, A:T.142, A:T.142, A:T.142, A:E.192, A:E.192 Water bridges: A:E.192 Salt bridges: A:R.95 Halogen bonds: A:E.12 FWD.2: 14 residues within 4Å: Chain B: Y.60, P.88, L.89, T.90, R.95, L.137, G.140, S.141, T.142, T.173, L.191, E.192, M.195, Y.219 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:P.88, B:T.90, B:S.141, B:T.142, B:T.142, B:T.142, B:E.192, B:E.192 Water bridges: B:K.143, B:E.192 Salt bridges: B:R.95

1 x FWF: N,N'-[biphenyl-4,4'-diyldi(2R)propane-2,1-diyl]dipropane-2-sulfonamide(Non-covalent)

FWF.3: 22 residues within 4Å: Chain A: I.91, K.103, P.104, F.105, M.106, S.107, S.216, K.217, G.218, L.238, S.241 Chain B: I.91, K.103, P.104, F.105, M.106, S.107, S.216, K.217, G.218, L.238, S.241 9 PLIP interactions: 4 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:I.91, A:P.104, A:L.238, B:I.91, B:P.104, B:L.238 Hydrogen bonds: A:G.218, B:P.104, B:G.218

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Durr, K.L. et al., Structure and Dynamics of AMPA Receptor GluA2 in Resting, Pre-Open, and Desensitized States. Cell (2014)

Release Date

2014-08-20

Peptides

Glutamate receptor 2,Glutamate receptor 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Glutamate receptor 2,Glutamate receptor 2