SMTL ID : 4u3g.1

Crystal structure of Escherichia coli bacterioferritin mutant D132F

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-24-mer

Ligands

32 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.117, I.121 Chain I: R.117, I.121 Chain Q: R.117, I.121 Ligand excluded by PLIP SO4.2: 3 residues within 4Å: Chain A: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.3: 6 residues within 4Å: Chain B: R.117, I.121 Chain D: R.117, I.121 Chain F: R.117, I.121 Ligand excluded by PLIP SO4.4: 3 residues within 4Å: Chain B: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.5: 3 residues within 4Å: Chain C: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain D: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.7: 3 residues within 4Å: Chain E: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.8: 3 residues within 4Å: Chain F: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.9: 6 residues within 4Å: Chain G: R.117, I.121 Chain O: R.117, I.121 Chain W: R.117, I.121 Ligand excluded by PLIP SO4.10: 3 residues within 4Å: Chain G: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain H: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.12: 3 residues within 4Å: Chain I: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.13: 6 residues within 4Å: Chain H: R.117, I.121 Chain J: R.117, I.121 Chain L: R.117, I.121 Ligand excluded by PLIP SO4.14: 3 residues within 4Å: Chain J: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.15: 3 residues within 4Å: Chain K: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.16: 3 residues within 4Å: Chain L: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.17: 6 residues within 4Å: Chain E: R.117, I.121 Chain M: R.117, I.121 Chain U: R.117, I.121 Ligand excluded by PLIP SO4.18: 3 residues within 4Å: Chain M: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.19: 6 residues within 4Å: Chain N: R.117, I.121 Chain P: R.117, I.121 Chain R: R.117, I.121 Ligand excluded by PLIP SO4.20: 3 residues within 4Å: Chain N: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.21: 3 residues within 4Å: Chain O: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.22: 3 residues within 4Å: Chain P: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.23: 3 residues within 4Å: Chain Q: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.24: 3 residues within 4Å: Chain R: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.25: 6 residues within 4Å: Chain C: R.117, I.121 Chain K: R.117, I.121 Chain S: R.117, I.121 Ligand excluded by PLIP SO4.26: 3 residues within 4Å: Chain S: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.27: 3 residues within 4Å: Chain T: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.28: 3 residues within 4Å: Chain U: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.29: 6 residues within 4Å: Chain T: R.117, I.121 Chain V: R.117, I.121 Chain X: R.117, I.121 Ligand excluded by PLIP SO4.30: 3 residues within 4Å: Chain V: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.31: 3 residues within 4Å: Chain W: G.145, L.146, Q.147 Ligand excluded by PLIP SO4.32: 3 residues within 4Å: Chain X: G.145, L.146, Q.147 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wong, S.G. et al., The B-type Channel Is a Major Route for Iron Entry into the Ferroxidase Center and Central Cavity of Bacterioferritin. J.Biol.Chem. (2015)

Release Date

2014-12-24

Peptides

Bacterioferritin: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

M
A

N
B

O
C

P
D

Q
E

R
F

S
G

T
H

U
I

V
J

W
K

X
L

Bacterioferritin