SMTL ID : 4u5s.1

IMPORTIN-ALPHA MINOR NLS SITE INHIBITOR

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.12 Å

Oligo State

monomer

Ligands

2 x 3D0: N-[(2S)-2-[(N~2~-acetyl-D-lysyl)amino]-3-(pyridin-3-ylmethoxy)propyl]-L-allothreonyl-D-phenylalaninamide(Non-covalent)

3D0.1: 14 residues within 4Å: Chain A: T.208, D.209, G.210, N.248, V.250, T.251, G.252, T.257, W.286, N.290, A.293, E.325, W.328, N.332 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:T.251, A:A.293, A:W.328 Hydrogen bonds: A:V.250, A:N.290, A:N.290, A:N.290 Water bridges: A:D.254 pi-Stacking: A:W.328 3D0.2: 18 residues within 4Å: Chain A: W.71, T.74, N.75, A.77, S.78, G.79, T.80, S.81, T.84, Q.110, W.113, N.117, D.121, N.157, W.160, T.161, N.164, R.167 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:T.74, A:W.113, A:W.113 Hydrogen bonds: A:T.80, A:T.84, A:W.113, A:W.113, A:N.117, A:D.121, A:N.164 Water bridges: A:N.75, A:S.81 pi-Stacking: A:W.71, A:W.113, A:W.113, A:W.160

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Holvey, R.S. et al., Selective Targeting of the TPX2 Site of Importin-alpha Using Fragment-Based Ligand Design. Chemmedchem (2015)

Release Date

2015-05-13

Peptides

Importin subunit alpha-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Importin subunit alpha-1

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