- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.67 Å
- Oligo State
- monomer
- Ligands
- 1 x MHF: 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID(Non-covalent)
- 1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 14 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 2 residues within 4Å:- Chain A: R.119, R.156
4 PLIP interactions:4 interactions with chain A- Water bridges: A:S.147, A:S.147
- Salt bridges: A:R.119, A:R.156
SO4.4: 6 residues within 4Å:- Chain A: R.119, K.133, R.137, V.143, R.144, S.145
12 PLIP interactions:12 interactions with chain A- Hydrogen bonds: A:S.145
- Water bridges: A:R.119, A:R.119, A:R.137, A:R.137, A:R.137, A:R.137, A:S.145, A:S.145
- Salt bridges: A:R.119, A:K.133, A:R.137
SO4.5: 2 residues within 4Å:- Chain A: R.292, K.295
4 PLIP interactions:4 interactions with chain A- Water bridges: A:R.292, A:R.292
- Salt bridges: A:R.292, A:K.295
SO4.6: 3 residues within 4Å:- Chain A: W.172, R.173, K.295
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:W.172
- Water bridges: A:S.291
- Salt bridges: A:R.173, A:K.295
SO4.7: 1 residues within 4Å:- Chain A: R.91
2 PLIP interactions:2 interactions with chain A- Water bridges: A:R.91
- Salt bridges: A:R.91
SO4.8: 3 residues within 4Å:- Chain A: K.279, G.280, R.294
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.280
- Water bridges: A:S.282
- Salt bridges: A:K.279, A:R.294
SO4.9: 2 residues within 4Å:- Chain A: S.282, R.283
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:S.282
- Water bridges: A:R.283, A:R.283, A:R.283
- Salt bridges: A:R.283
SO4.10: 3 residues within 4Å:- Chain A: G.431, D.432, R.448
4 PLIP interactions:4 interactions with chain A- Water bridges: A:G.431, A:G.431, A:D.432
- Salt bridges: A:R.448
SO4.11: 3 residues within 4Å:- Chain A: T.24, G.50, G.51
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:T.24, A:G.51
- Water bridges: A:T.24
SO4.12: 1 residues within 4Å:- Chain A: R.328
4 PLIP interactions:4 interactions with chain A- Water bridges: A:R.328, A:R.486, A:R.486
- Salt bridges: A:R.328
SO4.13: 3 residues within 4Å:- Chain A: K.202, L.203, S.204
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.204
- Water bridges: A:L.203, A:L.203
SO4.14: 3 residues within 4Å:- Chain A: G.97, D.98, R.101
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.98
- Salt bridges: A:R.101
SO4.15: 6 residues within 4Å:- Chain A: H.76, S.220, W.223, T.224, P.225
- Ligands: TRS.17
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:H.76
SO4.16: 4 residues within 4Å:- Chain A: W.299, N.402, W.405, D.412
No protein-ligand interaction detected (PLIP)- 1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Scheerer, P. et al., The Class III Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals a New Antenna Chromophore Binding Site and Alternative Photoreduction Pathways. J.Biol.Chem. (2015)
- Release Date
- 2015-03-25
- Peptides
- DNA photolyase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.67 Å
- Oligo State
- monomer
- Ligands
- 1 x MHF: 5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID(Non-covalent)
- 1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 14 x SO4: SULFATE ION(Non-functional Binders)
- 1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Scheerer, P. et al., The Class III Cyclobutane Pyrimidine Dimer Photolyase Structure Reveals a New Antenna Chromophore Binding Site and Alternative Photoreduction Pathways. J.Biol.Chem. (2015)
- Release Date
- 2015-03-25
- Peptides
- DNA photolyase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A