SMTL ID : 4u7p.1

Crystal structure of DNMT3A-DNMT3L complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.82 Å

Oligo State

hetero-1-1-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.91, C.94, C.113, C.116 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.91, A:C.94, A:C.113, A:C.116 ZN.2: 4 residues within 4Å: Chain A: C.48, C.51, C.68, C.71 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.48, A:C.51, A:C.68, A:C.71 ZN.3: 4 residues within 4Å: Chain A: C.103, C.108, C.137, C.140 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.103, A:C.108, A:C.137, A:C.140

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.4: 19 residues within 4Å: Chain A: F.194, D.195, G.196, I.197, T.199, S.217, E.218, V.219, C.220, D.240, V.241, R.242, G.261, P.263, L.284, E.310, R.445, S.446, W.447 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:I.197, A:T.199, A:V.219, A:C.220, A:V.241, A:R.242, A:E.310, A:W.447 pi-Stacking: A:F.194

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guo, X. et al., Structural insight into autoinhibition and histone H3-induced activation of DNMT3A. Nature (2015)

Release Date

2014-11-12

Peptides

DNA (cytosine-5)-methyltransferase 3A: A
DNA (cytosine-5)-methyltransferase 3-like: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

DNA (cytosine-5)-methyltransferase 3A

DNA (cytosine-5)-methyltransferase 3-like

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