SMTL ID : 4u9v.1

Crystal structure of NatD (Naa40p) bound to acetyl CoA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

1 x ACO: ACETYL COENZYME *A(Non-covalent)

ACO.1: 23 residues within 4Å: Chain A: N.57, M.58, C.114, Y.115, E.116, V.117, Q.118, L.119, R.124, R.125, K.126, G.127, L.128, G.129, K.130, T.151, N.156, G.158, A.159, Q.161, F.162, F.163, A.166 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:V.117, A:V.117, A:Q.118, A:L.119, A:R.125, A:R.125, A:G.127, A:G.127, A:L.128, A:G.129, A:K.130, A:N.156 Water bridges: A:R.125, A:K.126, A:K.126 Salt bridges: A:R.125 pi-Cation interactions: A:R.125, A:R.125

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Magin, R.S. et al., The Molecular Basis for Histone H4- and H2A-Specific Amino-Terminal Acetylation by NatD. Structure (2015)

Release Date

2015-01-28

Peptides

N-alpha-acetyltransferase 40: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

N-alpha-acetyltransferase 40