SMTL ID : 4ufr.1

Structure of the ectodomain of LGR5 in complex with R-spondin-2 (Fu1Fu2)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-2-2-mer

Ligands

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)

NAG.1: 4 residues within 4Å: Chain A: R.155, S.156, S.158, N.180 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.158 NAG.6: 2 residues within 4Å: Chain C: S.30, N.49 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:S.30

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: Y.333, R.354 Chain C: Y.333, R.354 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: H.100, T.103 Ligand excluded by PLIP CL.4: 3 residues within 4Å: Chain A: K.350, S.374, K.398 Ligand excluded by PLIP CL.5: 2 residues within 4Å: Chain B: R.57, R.60 Ligand excluded by PLIP CL.7: 3 residues within 4Å: Chain C: Y.76, H.100, T.103 Ligand excluded by PLIP CL.8: 2 residues within 4Å: Chain D: R.57, R.60 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zebisch, M. et al., Crystal Structure of R-Spondin 2 in Complex with the Ectodomains of its Receptors Lgr5 and Znrf3. J.Struct.Biol. (2015)

Release Date

2015-07-08

Peptides

LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5: AC
R-SPONDIN-2: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 5

R-SPONDIN-2

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