SMTL ID : 4uhq.1 (1 other biounit)

Crystal structure of the pyocin AP41 DNase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 9 residues within 4Å: Chain A: I.96, H.97, H.98, P.101, L.102, E.103, H.122, H.126 Ligands: NI.3 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:H.98, A:L.102, A:E.103 Water bridges: A:H.97 Salt bridges: A:H.97, A:H.98, A:H.122, A:H.122, A:H.126 CIT.2: 3 residues within 4Å: Chain A: S.69, F.73, Y.81 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.81, A:Y.81 Hydrogen bonds: A:S.69 Water bridges: A:S.67, A:S.67

1 x NI: NICKEL (II) ION(Non-covalent)

NI.3: 5 residues within 4Å: Chain A: H.97, H.98, H.122, H.126 Ligands: CIT.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.97, A:H.122, A:H.126, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joshi, A. et al., Structures of the Ultra-High Affinity Protein-Protein Complexes of Pyocins S2 and Ap41 and Their Cognate Immunity Proteins from Pseudomonas Aeruginosa. J.Mol.Biol. (2015)

Release Date

2015-08-05

Peptides

LARGE COMPONENT OF PYOCIN AP41: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LARGE COMPONENT OF PYOCIN AP41

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