SMTL ID : 4uhz.1

Crystal structure of the human RGMB-BMP2 complex, crystal form 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

hetero-1-1-mer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.12, S.13, K.15 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.13 Salt bridges: A:K.15 SO4.2: 3 residues within 4Å: Chain A: N.68, S.72, K.76 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.68, A:N.68 Salt bridges: A:K.76 SO4.3: 3 residues within 4Å: Chain A: N.102, Y.103, Q.104 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.104 Salt bridges: A:K.101 SO4.4: 1 residues within 4Å: Chain A: H.39 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.39 Salt bridges: A:H.39 SO4.5: 1 residues within 4Å: Chain A: R.16 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.16 Salt bridges: A:R.16 SO4.6: 2 residues within 4Å: Chain A: K.11, S.12 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.12, A:S.12 Salt bridges: A:H.44 SO4.7: 4 residues within 4Å: Chain B: C.33, R.37, N.71, C.72 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.73 Salt bridges: B:R.37 SO4.8: 5 residues within 4Å: Chain A: K.101 Chain B: Q.4, C.5, A.49, N.53 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Salt bridges: A:K.101 Hydrogen bonds: B:C.5, B:N.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Healey, E.G. et al., Repulsive Guidance Molecule is a Structural Bridge between Neogenin and Bone Morphogenetic Protein. Nat.Struct.Mol.Biol. (2015)

Release Date

2015-05-06

Peptides

BONE MORPHOGENETIC PROTEIN 2: A
RGM DOMAIN FAMILY MEMBER B: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

BONE MORPHOGENETIC PROTEIN 2

RGM DOMAIN FAMILY MEMBER B

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