- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 6 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 6 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
NAG-NAG-BMA-MAN.4: 7 residues within 4Å:- Chain A: N.163, T.165, I.240, M.242
- Chain E: S.217, P.219, L.220
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain E- Hydrophobic interactions: A:I.240
- Hydrogen bonds: E:L.220
NAG-NAG-BMA-MAN.5: 5 residues within 4Å:- Chain A: S.43, N.283, V.295, N.296
- Chain C: T.260
No protein-ligand interaction detected (PLIP)NAG-NAG-BMA-MAN.14: 7 residues within 4Å:- Chain A: S.217, P.219, L.220
- Chain C: N.163, T.165, I.240, M.242
2 PLIP interactions:1 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:L.220
- Hydrophobic interactions: C:I.240
NAG-NAG-BMA-MAN.15: 5 residues within 4Å:- Chain C: S.43, N.283, V.295, N.296
- Chain E: T.260
No protein-ligand interaction detected (PLIP)NAG-NAG-BMA-MAN.24: 7 residues within 4Å:- Chain C: S.217, P.219, L.220
- Chain E: N.163, T.165, I.240, M.242
2 PLIP interactions:1 interactions with chain E, 1 interactions with chain C- Hydrophobic interactions: E:I.240
- Hydrogen bonds: C:L.220
NAG-NAG-BMA-MAN.25: 5 residues within 4Å:- Chain A: T.260
- Chain E: S.43, N.283, V.295, N.296
No protein-ligand interaction detected (PLIP)- 3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.6: 2 residues within 4Å:- Chain A: N.6, N.7
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:N.7
NAG.16: 2 residues within 4Å:- Chain C: N.6, N.7
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:N.7
NAG.26: 2 residues within 4Å:- Chain E: N.6, N.7
1 PLIP interactions:1 interactions with chain E- Hydrogen bonds: E:N.7
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.7: 1 residues within 4Å:- Chain A: R.55
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.55
SO4.8: 4 residues within 4Å:- Chain A: S.93, P.97, Y.98, R.222
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.93, A:S.93, A:Y.98
- Salt bridges: A:R.222
SO4.9: 2 residues within 4Å:- Chain A: R.319
- Chain B: A.7
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.319
SO4.10: 6 residues within 4Å:- Chain A: E.323
- Chain B: G.13, W.14, E.15, G.16, R.25
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:E.15, B:G.16, A:E.323
- Salt bridges: B:R.25
SO4.17: 1 residues within 4Å:- Chain C: R.55
1 PLIP interactions:1 interactions with chain C- Salt bridges: C:R.55
SO4.18: 4 residues within 4Å:- Chain C: S.93, P.97, Y.98, R.222
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:S.93, C:S.93, C:Y.98
- Salt bridges: C:R.222
SO4.19: 2 residues within 4Å:- Chain C: R.319
- Chain D: A.7
1 PLIP interactions:1 interactions with chain C- Salt bridges: C:R.319
SO4.20: 6 residues within 4Å:- Chain C: E.323
- Chain D: G.13, W.14, E.15, G.16, R.25
4 PLIP interactions:3 interactions with chain D, 1 interactions with chain C- Hydrogen bonds: D:E.15, D:G.16, C:E.323
- Salt bridges: D:R.25
SO4.27: 1 residues within 4Å:- Chain E: R.55
1 PLIP interactions:1 interactions with chain E- Salt bridges: E:R.55
SO4.28: 4 residues within 4Å:- Chain E: S.93, P.97, Y.98, R.222
4 PLIP interactions:4 interactions with chain E- Hydrogen bonds: E:S.93, E:S.93, E:Y.98
- Salt bridges: E:R.222
SO4.29: 2 residues within 4Å:- Chain E: R.319
- Chain F: A.7
1 PLIP interactions:1 interactions with chain E- Salt bridges: E:R.319
SO4.30: 6 residues within 4Å:- Chain E: E.323
- Chain F: G.13, W.14, E.15, G.16, R.25
4 PLIP interactions:3 interactions with chain F, 1 interactions with chain E- Hydrogen bonds: F:E.15, F:G.16, E:E.323
- Salt bridges: F:R.25
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Collins, P.J. et al., Recent Evolution of Equine Influenza and the Origin of Canine Influenza. Proc.Natl.Acad.Sci.USA (2014)
- Release Date
- 2014-07-23
- Peptides
- HA1: ACE
HA2: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AB
BD
BF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.50 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 6 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 6 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
- 3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 12 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Collins, P.J. et al., Recent Evolution of Equine Influenza and the Origin of Canine Influenza. Proc.Natl.Acad.Sci.USA (2014)
- Release Date
- 2014-07-23
- Peptides
- HA1: ACE
HA2: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AB
BD
BF
B