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SMTL ID : 4uqv.2
(5 other biounits)
methanococcus jannaschii serine hydroxymethyl-transferase in complex with PLP
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.00 Å
Oligo State
homo-dimer
Ligands
2 x
PLP
:
PYRIDOXAL-5'-PHOSPHATE
(Covalent)
PLP.1:
17 residues within 4Å:
Chain A:
S.92
,
G.93
,
V.94
,
N.97
,
S.123
,
H.124
,
G.170
,
D.196
,
A.198
,
S.223
,
H.225
,
K.226
,
Q.232
,
G.233
Chain B:
Y.50
,
S.256
,
N.257
16
PLIP interactions
:
13 interactions with chain A
,
3 interactions with chain B
Hydrophobic interactions:
A:A.198
,
A:K.226
Hydrogen bonds:
A:G.93
,
A:V.94
,
A:N.97
,
A:S.123
,
A:G.170
,
A:S.223
,
A:K.226
,
A:G.233
,
B:Y.50
,
B:S.256
,
B:S.256
Salt bridges:
A:H.225
,
A:K.226
pi-Cation interactions:
A:H.121
PLP.2:
16 residues within 4Å:
Chain A:
Y.50
,
S.256
,
N.257
Chain B:
S.92
,
G.93
,
V.94
,
H.121
,
H.124
,
G.170
,
S.171
,
D.196
,
A.198
,
H.199
,
S.223
,
H.225
,
K.226
14
PLIP interactions
:
12 interactions with chain B
,
2 interactions with chain A
Hydrophobic interactions:
B:H.121
,
B:D.196
,
B:A.198
,
B:K.226
Hydrogen bonds:
B:G.93
,
B:V.94
,
B:H.121
,
B:G.170
,
B:H.199
,
B:S.223
,
A:Y.50
,
A:N.257
Salt bridges:
B:H.225
pi-Cation interactions:
B:H.121
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Angelucci, F. et al., The Crystal Structure of Archaeal Serine Hydroxymethyltransferase Reveals Idiosyncratic Features Likely Required to Withstand High Temperatures. Proteins (2014)
Release Date
2014-07-30
Peptides
SERINE HYDROXYMETHYLTRANSFERASE:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
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Secondary Structure
None
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SERINE HYDROXYMETHYLTRANSFERASE
Related Entries With Identical Sequence
4uqv.1
|
4uqv.3
|
4uqv.4
|
4uqv.5
|
4uqv.6
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
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Transparent
Resolution
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High
Extreme