- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- hetero-2-1-mer
- Ligands
- 18 x SO4: SULFATE ION(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 4 residues within 4Å:- Chain A: A.9, A.11, A.94, T.95
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:A.9, A:A.11, A:T.95, A:T.95, A:T.95
GOL.25: 4 residues within 4Å:- Chain C: A.9, A.11, A.94, T.95
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:A.9, C:A.11, C:T.95, C:T.95
- 3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG-NAG.3: 4 residues within 4Å:- Chain B: P.36, N.57, S.59, D.60
No protein-ligand interaction detected (PLIP)NAG-NAG.4: 2 residues within 4Å:- Chain B: K.62, N.78
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:K.62
NAG-NAG.5: 3 residues within 4Å:- Chain B: N.93, Y.124
- Ligands: SO4.16
No protein-ligand interaction detected (PLIP)- 1 x CA: CALCIUM ION(Non-covalent)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Finci, L.I. et al., The Crystal Structure of Netrin-1 in Complex with Dcc Reveals the Bi-Functionality of Netrin-1 as a Guidance Cue. Neuron (2014)
- Release Date
- 2014-09-10
- Peptides
- NETRIN RECEPTOR DCC: AC
NETRIN-1: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BC
BB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- hetero-2-1-mer
- Ligands
- 18 x SO4: SULFATE ION(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 1 x CA: CALCIUM ION(Non-covalent)
- 1 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Finci, L.I. et al., The Crystal Structure of Netrin-1 in Complex with Dcc Reveals the Bi-Functionality of Netrin-1 as a Guidance Cue. Neuron (2014)
- Release Date
- 2014-09-10
- Peptides
- NETRIN RECEPTOR DCC: AC
NETRIN-1: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BC
BB
A