- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- monomer
- Ligands
- 1 x TRP: TRYPTOPHAN(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
NA.2: 5 residues within 4Å:- Chain A: G.26, V.29, A.322, S.325, S.326
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:A.322
- Water bridges: A:S.325
NA.3: 6 residues within 4Å:- Chain A: A.28, V.29, N.33, T.233, D.265
- Ligands: TRP.1
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Ligand interactions- Hydrogen bonds: A:N.33, A:T.233, A:D.265, W.1, W.1
- 4 x BNG: nonyl beta-D-glucopyranoside(Non-covalent)
BNG.4: 6 residues within 4Å:- Chain A: K.203, L.206, A.207, F.210, S.211
- Ligands: BNG.5
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:L.206, A:F.210, A:F.210
BNG.5: 4 residues within 4Å:- Chain A: F.210, S.211, P.212
- Ligands: BNG.4
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:F.210, A:F.210
- Hydrogen bonds: A:S.211
BNG.6: 5 residues within 4Å:- Chain A: A.191, I.194, Y.195, T.198
- Ligands: BNG.13
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:A.191, A:I.194, A:Y.195
- Hydrogen bonds: A:T.198, A:T.198
BNG.13: 6 residues within 4Å:- Chain A: A.191, Y.195, S.304, I.305, R.306
- Ligands: BNG.6
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:Y.195, A:Y.195, A:I.305
- Hydrogen bonds: A:Y.195, A:Y.195, A:R.306
- 6 x LMU: DODECYL-ALPHA-D-MALTOSIDE(Non-covalent)
LMU.7: 12 residues within 4Å:- Chain A: L.118, F.119, F.122, F.140, G.143, F.144, N.147, L.150, F.153, W.154, L.157
- Ligands: LMU.8
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:F.122, A:F.153, A:W.154, A:L.157
- Hydrogen bonds: A:F.140, A:N.147
LMU.8: 5 residues within 4Å:- Chain A: T.149, L.150, F.153
- Ligands: LMU.7, LMU.9
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:L.150, A:F.153
- Hydrogen bonds: A:T.149
LMU.9: 8 residues within 4Å:- Chain A: T.149, L.152, A.156, I.160, T.358, I.362
- Ligands: LMU.8, LMU.10
5 PLIP interactions:5 interactions with chain A- Hydrophobic interactions: A:L.152, A:A.156, A:I.160, A:T.358, A:I.362
LMU.10: 5 residues within 4Å:- Chain A: I.160, W.164, I.168, K.347
- Ligands: LMU.9
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:I.160, A:I.168, A:K.347
LMU.11: 3 residues within 4Å:- Chain A: F.342, W.344, Q.348
1 PLIP interactions:1 interactions with chain A- Hydrophobic interactions: A:W.344
LMU.12: 5 residues within 4Å:- Chain A: Y.223, A.441, I.444, V.445, S.448
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:Y.223, A:I.444, A:V.445
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Malinauskaite, L. et al., A Mechanism for Intracellular Release of Na+ by Neurotransmitter/Sodium Symporters. Nat.Struct.Mol.Biol. (2014)
- Release Date
- 2014-09-24
- Peptides
- TRANSPORTER: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- monomer
- Ligands
- 1 x TRP: TRYPTOPHAN(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 4 x BNG: nonyl beta-D-glucopyranoside(Non-covalent)
- 6 x LMU: DODECYL-ALPHA-D-MALTOSIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Malinauskaite, L. et al., A Mechanism for Intracellular Release of Na+ by Neurotransmitter/Sodium Symporters. Nat.Struct.Mol.Biol. (2014)
- Release Date
- 2014-09-24
- Peptides
- TRANSPORTER: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A - Membrane
-
We predict this structure to be a membrane protein.