SMTL ID : 4usx.1

The Structure of the C-terminal YadA-like domain of BPSL2063 from Burkholderia pseudomallei

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-trimer

Ligands

7 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: V.86, Y.87, G.110, I.111 Chain C: N.107 No protein-ligand interaction detected (PLIP) MG.2: 9 residues within 4Å: Chain A: D.122, S.123, Q.124 Chain B: N.88, A.89, D.90, G.91, H.115 Ligands: MG.3 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Metal complexes: A:S.123, B:N.88 MG.3: 6 residues within 4Å: Chain A: D.122 Chain B: Y.87, N.88, G.91, T.92 Ligands: MG.2 3 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B, 1 Ligand-Water interactions Metal complexes: A:D.122, B:T.92, H2O.9 MG.4: 4 residues within 4Å: Chain A: D.104 Chain B: S.83, Y.84, T.85 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.104 MG.5: 1 residues within 4Å: Chain B: R.198 No protein-ligand interaction detected (PLIP) MG.6: 6 residues within 4Å: Chain B: T.190, I.191 Chain C: V.194, A.195, G.197, A.206 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:A.195, C:A.206 MG.7: 5 residues within 4Å: Chain B: D.122 Chain C: Y.87, N.88, G.91, T.92 3 PLIP interactions: 1 interactions with chain B, 1 interactions with chain C, 1 Ligand-Water interactions Metal complexes: B:D.122, C:T.92, H2O.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gourlay, L.J. et al., Selecting Soluble/Foldable Protein Domains Through Single-Gene or Genomic Orf Filtering: Structure of the Head Domain of Burkholderia Pseudomallei Antigen Bpsl2063. Acta Crystallogr.,Sect.D (2015)

Release Date

2015-07-22

Peptides

TRIMERIC AUTOTRANSPORTER ADHESIN: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

TRIMERIC AUTOTRANSPORTER ADHESIN