SMTL ID : 4uta.1 (1 other biounit)

Crystal structure of dengue 2 virus envelope glycoprotein in complex with the Fab fragment of the broadly neutralizing human antibody EDE1 C8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG- BMA- MAN- MAN- FUC: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN-FUC.1: 5 residues within 4Å: Chain A: K.64, T.66, N.67, R.89, K.118 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rouvinski, A. et al., Recognition Determinants of Broadly Neutralizing Human Antibodies Against Dengue Viruses. Nature (2015)

Release Date

2015-01-28

Peptides

ENVELOPE GLYCOPROTEIN E: A
BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8 HEAVY CHAIN: B
BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8 LIGHT CHAIN: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
I

C
M

ENVELOPE GLYCOPROTEIN E

BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8 HEAVY CHAIN

BROADLY NEUTRALIZING HUMAN ANTIBODY EDE1 C8 LIGHT CHAIN

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