SMTL ID : 4uwd.1

HIF prolyl hydroxylase 2 (PHD2/ EGLN1) D315E VARIANT in complex with Mn(II) and N-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (IOX3/UN9)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 5 residues within 4Å: Chain A: H.139, E.141, F.192, H.200 Ligands: UN9.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.139, A:E.141, A:H.200, H2O.5

1 x UN9: N-[(1-CHLORO-4-HYDROXYISOQUINOLIN-3-YL)CARBONYL]GLYCINE(Non-covalent)

UN9.2: 17 residues within 4Å: Chain A: D.80, I.82, M.125, A.127, Y.129, Y.136, H.139, E.141, I.153, Y.155, L.169, H.200, V.202, R.209, A.211, W.215 Ligands: MN.1 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.82 Hydrogen bonds: A:Y.129, A:Y.155 Water bridges: A:T.213, A:T.213 Salt bridges: A:R.209 pi-Stacking: A:Y.136, A:Y.136

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tarhonskaya, H. et al., Investigating the Contribution of the Active Site Environment to the Slow Reaction of Hypoxia-Inducible Factor Prolyl Hydroxylase Domain 2 with Oxygen. Biochem.J. (2014)

Release Date

2014-08-27

Peptides

EGL NINE HOMOLOG 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

EGL NINE HOMOLOG 1