SMTL ID : 4w5h.1

New structural conformations of adenylate kinase from Streptococcus pneumoniae D39

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

monomer

Ligands

2 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 6 residues within 4Å: Chain A: P.14, G.15, A.16, G.17, K.18, G.19 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.15, A:G.17, A:K.18, A:G.19 Water bridges: A:T.20, A:R.172 TRS.3: 2 residues within 4Å: Chain A: H.33, D.38 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.33, A:D.38, A:D.38

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.2: 2 residues within 4Å: Chain A: F.40, R.41 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thach, T.T. et al., New crystal structures of adenylate kinase from Streptococcus pneumoniae D39 in two conformations. Acta Crystallogr.,Sect.F (2014)

Release Date

2014-11-26

Peptides

Adenylate kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenylate kinase

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