SMTL ID : 4whi.1

Crystal structure of C-terminal domain of penicillin binding protein Rv0907

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

16 x BR: BROMIDE ION(Non-covalent)

BR.1: 3 residues within 4Å: Chain A: H.38, Q.41, R.43 Ligand excluded by PLIP BR.2: 1 residues within 4Å: Chain A: N.50 Ligand excluded by PLIP BR.3: 2 residues within 4Å: Chain A: G.23, V.24 Ligand excluded by PLIP BR.4: 4 residues within 4Å: Chain A: Q.51, F.53, S.68, N.71 Ligand excluded by PLIP BR.5: 2 residues within 4Å: Chain A: F.53, D.54 Ligand excluded by PLIP BR.6: 3 residues within 4Å: Chain A: S.78, E.90, Y.91 Ligand excluded by PLIP BR.7: 3 residues within 4Å: Chain A: G.5, K.6, Q.7 Ligand excluded by PLIP BR.8: 2 residues within 4Å: Chain A: D.61, T.62 Ligand excluded by PLIP BR.9: 2 residues within 4Å: Chain A: S.15, H.57 Ligand excluded by PLIP BR.10: 2 residues within 4Å: Chain A: S.76, I.77 Ligand excluded by PLIP BR.11: 4 residues within 4Å: Chain A: A.26, N.27, P.32 Ligands: BR.12 Ligand excluded by PLIP BR.12: 3 residues within 4Å: Chain A: A.26, P.32 Ligands: BR.11 Ligand excluded by PLIP BR.13: 2 residues within 4Å: Chain A: A.10, N.11 Ligand excluded by PLIP BR.14: 1 residues within 4Å: Chain A: N.11 Ligand excluded by PLIP BR.15: 3 residues within 4Å: Chain A: G.47, P.48, K.49 Ligand excluded by PLIP BR.16: 2 residues within 4Å: Chain A: T.56, H.57 Ligand excluded by PLIP

1 x NI: NICKEL (II) ION(Non-covalent)

NI.17: 1 residues within 4Å: Chain A: S.1 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:S.1, H2O.1, H2O.2, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, C. et al., Crystal structure of C-terminal domain of penicillin binding protein Rv0907. To Be Published

Release Date

2014-10-08

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase