SMTL ID : 4wig.1

Crystal structure of E47D mutant cytidine deaminase from Mycobacterium tuberculosis (MtCDA E47D)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

homo-tetramer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.56, E.58, C.89, R.91, C.92 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.56, A:C.89, A:C.92, H2O.1 ZN.2: 5 residues within 4Å: Chain B: C.56, E.58, C.89, R.91, C.92 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:C.56, B:C.89, B:C.92, H2O.7 ZN.3: 5 residues within 4Å: Chain C: C.56, E.58, C.89, R.91, C.92 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:C.56, C:C.89, C:C.92, H2O.12 ZN.4: 5 residues within 4Å: Chain D: C.56, E.58, C.89, R.91, C.92 4 PLIP interactions: 3 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:C.56, D:C.89, D:C.92, H2O.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sanchez-Quitian, Z.A. et al., Functional and structural evidence for the catalytic role played by glutamate-47 residue in the mode of action of Mycobacterium tuberculosis cytidine deaminase. Rsc Adv (2015)

Release Date

2015-08-12

Peptides

Cytidine deaminase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Cytidine deaminase