SMTL ID : 4wii.1

HUMAN SPLICING FACTOR, CONSTRUCT 3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-dimer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.14, P.16, G.17 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.17 Salt bridges: A:R.14

8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: S.102, E.176, P.177, L.178, E.179 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.102, A:S.102, A:E.179, A:E.179 EDO.3: 4 residues within 4Å: Chain A: I.56, N.57, K.58, G.59 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:I.56, A:K.58, A:G.59 EDO.4: 2 residues within 4Å: Chain A: N.57, K.60 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.57 EDO.5: 5 residues within 4Å: Chain A: F.28, F.64, F.94, A.95, T.96 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.96 EDO.6: 4 residues within 4Å: Chain B: T.37, E.38, D.39 Ligands: EDO.8 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.38, B:D.39, B:D.39 EDO.7: 1 residues within 4Å: Chain B: R.153 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.153 EDO.8: 4 residues within 4Å: Chain B: T.37, D.39, R.43 Ligands: EDO.6 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:T.37, B:D.39, B:R.43, B:R.43 EDO.9: 4 residues within 4Å: Chain B: F.28, F.64, A.95, T.96 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.96

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, M. et al., The structure of human SFPQ reveals a coiled-coil mediated polymer essential for functional aggregation in gene regulation. Nucleic Acids Res. (2015)

Release Date

2015-04-01

Peptides

Splicing factor, proline- and glutamine-rich: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Splicing factor, proline- and glutamine-rich

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