SMTL ID : 4wiu.1

Crystal Structure of PEPCK (Rv0211) from Mycobacterium tuberculosis in complex with oxalate and Mn2+

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: K.231, H.251, D.298 Ligands: OXL.2 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.251, A:D.298, H2O.23

1 x OXL: OXALATE ION(Non-covalent)

OXL.2: 7 residues within 4Å: Chain A: R.83, K.231, H.251, D.298, R.391, F.471 Ligands: MN.1 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:D.298 Water bridges: A:R.83, A:R.83, A:R.391 Salt bridges: A:R.83, A:K.230, A:K.231, A:K.231, A:H.251, A:R.391

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 9 residues within 4Å: Chain A: E.85, T.88, I.90, T.101, N.102, N.103, R.236, L.469, P.470 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:I.90, A:N.102, A:N.103, A:N.103, A:N.103, A:R.236 Water bridges: A:T.88, A:T.88, A:T.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, H.L., Crystal Structure of PEPCK (Rv0211) from Mycobacterium tuberculosis in complex with oxalate and Mn2+. to be published

Release Date

2014-10-22

Peptides

Phosphoenolpyruvate carboxykinase [GTP]: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphoenolpyruvate carboxykinase [GTP]