SMTL ID : 4wky.1

Streptomcyes albus JA3453 oxazolomycin ketosynthase domain OzmN KS2

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: K.269, P.411, R.413, Q.431 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.431 Salt bridges: A:K.269, A:R.413 SO4.6: 5 residues within 4Å: Chain A: R.132, H.133, L.210, P.211, W.584 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:W.584 Water bridges: A:Q.212 Salt bridges: A:R.132, A:H.133 SO4.7: 3 residues within 4Å: Chain B: K.269, R.413, Q.431 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Q.431 Water bridges: B:D.8, B:K.269 Salt bridges: B:K.269, B:R.413 SO4.10: 5 residues within 4Å: Chain B: R.132, H.133, P.211, W.584, P.587 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:W.584 Water bridges: B:Q.212 Salt bridges: B:R.132, B:H.133

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 3 residues within 4Å: Chain A: Y.164 Chain B: S.282, Y.283 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Y.164, B:Y.283 Water bridges: A:K.165, A:K.165

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 3 residues within 4Å: Chain A: R.112, R.113, R.490 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.113, A:R.490 Water bridges: A:A.491 EDO.4: 3 residues within 4Å: Chain A: R.454, H.492, R.493 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.492, A:R.493, A:R.493 EDO.5: 3 residues within 4Å: Chain A: S.282, Y.283 Chain B: Y.164 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Water bridges: B:K.165, A:A.284 Hydrogen bonds: A:Y.283 EDO.8: 4 residues within 4Å: Chain B: T.455, R.456, T.457, H.494 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.456, B:T.457, B:H.494 EDO.9: 4 residues within 4Å: Chain B: G.20, G.37, I.38, T.39 2 PLIP interactions: 2 interactions with chain B Water bridges: B:G.20, B:I.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lohman, J.R. et al., Structural and evolutionary relationships of "AT-less" type I polyketide synthase ketosynthases. Proc.Natl.Acad.Sci.USA (2015)

Release Date

2014-10-29

Peptides

Beta-ketoacyl synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Beta-ketoacyl synthase