SMTL ID : 4wl0.1

Ligand-free structure of human platelet phosphofructokinase in an R-state, crystal form I

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.89 Å

Oligo State

homo-tetramer

Ligands

8 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: R.480, H.670 Chain B: R.575, R.664 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Salt bridges: B:R.575, B:R.664, A:R.480, A:H.670 PO4.2: 6 residues within 4Å: Chain A: G.232, K.263, R.429, R.433, G.466, G.467 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.467 Salt bridges: A:K.263, A:R.429, A:R.433 PO4.3: 6 residues within 4Å: Chain B: G.232, K.263, R.429, R.433, G.466, G.467 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.467 Salt bridges: B:K.263, B:R.429, B:R.433 PO4.4: 7 residues within 4Å: Chain B: R.43, R.47, S.82, S.83, K.566, G.598, R.631 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.83 Salt bridges: B:R.43, B:R.47, B:K.566, B:R.631 PO4.5: 4 residues within 4Å: Chain C: R.480, H.670 Chain D: R.575, R.664 4 PLIP interactions: 2 interactions with chain D, 2 interactions with chain C Salt bridges: D:R.575, D:R.664, C:R.480, C:H.670 PO4.6: 6 residues within 4Å: Chain C: G.232, K.263, R.429, R.433, G.466, G.467 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:G.232, C:G.467 Salt bridges: C:K.263, C:R.429, C:R.433 PO4.7: 6 residues within 4Å: Chain D: G.232, K.263, R.429, R.433, G.466, G.467 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:G.232, D:G.467 Salt bridges: D:K.263, D:R.429, D:R.433 PO4.8: 7 residues within 4Å: Chain D: R.43, R.47, S.82, S.83, K.566, G.598, R.631 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:S.83 Salt bridges: D:R.43, D:R.47, D:K.566, D:R.631

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kloos, M. et al., Crystal structure of human platelet phosphofructokinase-1 locked in an activated conformation. Biochem.J. (2015)

Release Date

2015-06-03

Peptides

ATP-dependent 6-phosphofructokinase, platelet type: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

ATP-dependent 6-phosphofructokinase, platelet type

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