SMTL ID : 4wt9.1

APO CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH E86Q E87Q S15G C223H V321I AND DELTA8 MUTATIONS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 6 residues within 4Å: Chain A: G.377, P.378, R.379, G.380, R.381, R.383 Ligand excluded by PLIP

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.2: 5 residues within 4Å: Chain A: N.144, E.145, V.146, R.396, H.404 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.146 Water bridges: A:S.409 Salt bridges: A:R.396

1 x PG6: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE(Non-covalent)

PG6.3: 8 residues within 4Å: Chain A: K.102, Y.103, P.137, T.139, F.269, N.270, S.271, G.273 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Appleby, T.C. et al., Structural basis for RNA replication by the hepatitis C virus polymerase. Science (2015)

Release Date

2015-02-11

Peptides

RNA-directed RNA polymerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

RNA-directed RNA polymerase

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