Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 4wty.1
Structure of the PTP-like myo-inositol phosphatase from Selenomonas ruminantium in complex with myo-inositol-(1,3,4,5)-tetrakisphosphate
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.10 Å
Oligo State
homo-dimer
Ligands
2 x
4IP
:
INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE
(Non-covalent)
4IP.1:
14 residues within 4Å:
Chain A:
R.53
,
D.149
,
K.185
,
D.219
,
H.220
,
S.248
,
E.249
,
A.250
,
G.251
,
V.252
,
G.253
,
R.254
,
K.301
,
Y.305
21
PLIP interactions
:
21 interactions with chain A
Hydrogen bonds:
A:S.248
,
A:E.249
,
A:A.250
,
A:G.251
,
A:V.252
,
A:G.253
,
A:R.254
,
A:Y.305
Water bridges:
A:R.53
,
A:R.53
,
A:H.220
,
A:K.308
Salt bridges:
A:R.53
,
A:K.185
,
A:K.185
,
A:H.220
,
A:H.220
,
A:H.220
,
A:R.254
,
A:K.301
,
A:K.301
4IP.6:
14 residues within 4Å:
Chain B:
R.53
,
D.149
,
K.185
,
D.219
,
H.220
,
S.248
,
E.249
,
A.250
,
G.251
,
V.252
,
G.253
,
R.254
,
K.301
,
Y.305
23
PLIP interactions
:
23 interactions with chain B
Hydrogen bonds:
B:S.248
,
B:E.249
,
B:A.250
,
B:G.251
,
B:V.252
,
B:G.253
,
B:R.254
Water bridges:
B:R.53
,
B:R.53
,
B:K.185
,
B:K.185
,
B:H.220
,
B:H.220
,
B:Y.305
Salt bridges:
B:R.53
,
B:K.185
,
B:K.185
,
B:H.220
,
B:H.220
,
B:H.220
,
B:R.254
,
B:K.301
,
B:K.301
6 x
GOL
:
GLYCEROL
(Non-functional Binders)
GOL.2:
5 residues within 4Å:
Chain A:
Y.235
,
P.239
,
Q.240
,
A.242
,
K.266
7
PLIP interactions
:
7 interactions with chain A
Hydrogen bonds:
A:Y.235
,
A:Q.240
,
A:A.242
Water bridges:
A:K.266
,
A:K.266
,
A:K.266
,
A:K.266
GOL.3:
5 residues within 4Å:
Chain A:
D.55
,
N.56
,
D.57
,
R.64
,
S.102
4
PLIP interactions
:
4 interactions with chain A
Hydrogen bonds:
A:D.55
,
A:D.57
,
A:D.57
,
A:S.102
GOL.4:
4 residues within 4Å:
Chain A:
R.165
,
H.169
,
V.198
,
E.203
3
PLIP interactions
:
3 interactions with chain A
Hydrogen bonds:
A:R.165
,
A:H.169
,
A:E.203
GOL.7:
5 residues within 4Å:
Chain B:
Y.235
,
P.239
,
Q.240
,
A.242
,
K.266
6
PLIP interactions
:
6 interactions with chain B
Hydrogen bonds:
B:Y.235
,
B:A.242
Water bridges:
B:H.97
,
B:K.266
,
B:K.266
,
B:K.266
GOL.8:
5 residues within 4Å:
Chain B:
D.55
,
N.56
,
D.57
,
R.64
,
S.102
4
PLIP interactions
:
4 interactions with chain B
Hydrogen bonds:
B:D.55
,
B:D.57
,
B:D.57
,
B:S.102
GOL.9:
4 residues within 4Å:
Chain B:
R.165
,
H.169
,
V.198
,
E.203
3
PLIP interactions
:
3 interactions with chain B
Hydrogen bonds:
B:H.169
,
B:E.203
Water bridges:
B:V.198
1 x
CL
:
CHLORIDE ION
(Non-functional Binders)
CL.5:
2 residues within 4Å:
Chain A:
S.156
,
Q.157
Ligand excluded by PLIP
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Bruder, L.M. et al., Structure of the PTP-like phytase from Selenomonas ruminantium in complex with myo-inositol-(1,3,4,5)-tetrakisphosphate. To Be Published
Release Date
2015-11-04
Peptides
MYO-INOSITOL PHOSPHOHYDROLASE:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
MYO-INOSITOL PHOSPHOHYDROLASE
Toggle Identical (AB)
Related Entries With Identical Sequence
4wu2.1
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme