SMTL ID : 4wv6.1

Heterodimer of Importin alpha 1 with nuclear localization signal of TAF8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

hetero-1-2-mer

Ligands

12 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: E.268, Q.271, R.308 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.308, A:R.308 Water bridges: A:D.275 EDO.2: 3 residues within 4Å: Chain A: Q.314, N.317, H.318 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.314 EDO.3: 5 residues within 4Å: Chain A: S.29, S.30, V.32, Q.35, R.72 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.35, A:R.72, A:R.72 EDO.4: 6 residues within 4Å: Chain A: D.267, A.306, G.307, R.308, G.349 Chain C: K.10 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.267 Water bridges: A:A.306 EDO.5: 7 residues within 4Å: Chain A: D.22, I.23, G.26, N.34, Q.37, A.38, A.41 1 PLIP interactions: 1 interactions with chain A Water bridges: A:A.38 EDO.6: 4 residues within 4Å: Chain A: V.232, K.233, G.235, V.272 1 PLIP interactions: 1 interactions with chain A Water bridges: A:K.233 EDO.7: 6 residues within 4Å: Chain A: Q.313, V.316, T.351, E.353, Q.354, Y.357 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.313, A:E.353 Water bridges: A:T.351, A:E.353 EDO.8: 7 residues within 4Å: Chain A: Q.419, N.420, H.421, E.422, N.423, E.424, Y.427 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.421 EDO.9: 7 residues within 4Å: Chain A: S.329, K.330, A.331, D.332, F.333, Q.336, L.370 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.330, A:Q.336 EDO.10: 3 residues within 4Å: Chain A: T.266, D.267, E.268 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.267, A:D.267, A:E.268, A:E.268 Water bridges: A:R.308 EDO.11: 6 residues within 4Å: Chain A: R.257, K.295, E.296, W.299, E.338 Chain C: S.12 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C Hydrogen bonds: A:E.296 Water bridges: A:W.299, C:S.12 EDO.12: 3 residues within 4Å: Chain A: R.308, Q.309, D.310 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.309, A:D.310, A:D.310 Water bridges: A:G.349

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Trowitzsch, S. et al., Cytoplasmic TAF2-TAF8-TAF10 complex provides evidence for nuclear holo-TFIID assembly from preformed submodules. Nat Commun (2015)

Release Date

2015-01-28

Peptides

Importin subunit alpha-1: A
Transcription initiation factor TFIID subunit 8: BC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Importin subunit alpha-1

Transcription initiation factor TFIID subunit 8