SMTL ID : 4x09.1

Structure of human RNase 6 in complex with sulphate anions

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: Q.15, H.16, V.122, H.123, L.124 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:L.124 Water bridges: A:Q.15, A:Q.15, A:Q.15, A:Q.15, A:H.123 Salt bridges: A:H.16, A:H.123 SO4.2: 2 residues within 4Å: Chain A: R.67, H.68 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.68 Salt bridges: A:R.67 SO4.3: 1 residues within 4Å: Chain A: R.26 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Q.23 Salt bridges: A:R.26 SO4.4: 3 residues within 4Å: Chain A: H.37, C.38, H.40 3 PLIP interactions: 3 interactions with chain A Water bridges: A:C.38 Salt bridges: A:H.37, A:H.40

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 1 residues within 4Å: Chain A: S.60 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.60, A:S.60, A:S.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Prats-Ejarque, G. et al., The first crystal structure of human RNase 6 reveals a novel substrate-binding and cleavage site arrangement. Biochem.J. (2016)

Release Date

2016-04-06

Peptides

Ribonuclease K6: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribonuclease K6

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