SMTL ID : 4x2a.1

Crystal structure of mouse glyoxalase I complexed with baicalein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.127, E.173 Chain B: Q.34, E.100 Ligands: 3WL.3 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Metal complexes: A:H.127, A:E.173, B:E.100 ZN.2: 5 residues within 4Å: Chain A: Q.34, E.100 Chain B: H.127, E.173 Ligands: 3WL.4 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Metal complexes: A:E.100, B:H.127, B:E.173

2 x 3WL: 5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one(Non-covalent)

3WL.3: 13 residues within 4Å: Chain A: H.127, M.158, E.173, I.180, A.181 Chain B: Q.34, L.61, F.63, F.68, L.70, F.93, E.100 Ligands: ZN.1 6 PLIP interactions: 1 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:I.180, B:L.61, B:F.63, B:L.70, B:F.93 Hydrogen bonds: B:Q.34 3WL.4: 14 residues within 4Å: Chain A: Q.34, L.61, F.63, F.68, L.70, F.72, F.93, E.100 Chain B: H.127, M.158, E.173, I.180, I.183 Ligands: ZN.2 7 PLIP interactions: 5 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:L.61, A:F.63, A:L.70, A:F.93, B:I.180, B:I.183 Hydrogen bonds: A:Q.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H. et al., In Vitro Inhibition of Glyoxalase І by Flavonoids: New Insights from Crystallographic Analysis. Curr Top Med Chem (2016)

Release Date

2015-09-16

Peptides

Lactoylglutathione lyase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lactoylglutathione lyase

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