- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 12 x GOL: GLYCEROL(Non-functional Binders)
- 2 x ZN: ZINC ION(Non-covalent)
ZN.7: 3 residues within 4Å:- Chain A: H.26, H.133, D.149
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.26, A:H.133, A:D.149, H2O.3
ZN.19: 3 residues within 4Å:- Chain B: H.26, H.133, D.149
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:H.26, B:H.133, B:D.149, H2O.12
- 10 x CHT: CHOLINE ION(Non-covalent)
CHT.8: 5 residues within 4Å:- Chain A: W.220, W.228, Y.249, M.257, E.275
4 PLIP interactions:4 interactions with chain A- pi-Cation interactions: A:W.220, A:W.220, A:W.228, A:W.228
CHT.9: 4 residues within 4Å:- Chain A: W.241, W.248, Y.264, Y.269
5 PLIP interactions:5 interactions with chain A- pi-Cation interactions: A:W.241, A:W.241, A:W.248, A:W.248, A:Y.264
CHT.10: 5 residues within 4Å:- Chain A: W.261, W.268, Y.293, L.301
- Chain B: D.312
6 PLIP interactions:1 interactions with chain B, 5 interactions with chain A- Hydrogen bonds: B:D.312
- pi-Cation interactions: A:W.261, A:W.261, A:W.268, A:W.268, A:Y.293
CHT.11: 5 residues within 4Å:- Chain A: F.199, W.206, Y.229, M.237, E.254
2 PLIP interactions:2 interactions with chain A- pi-Cation interactions: A:F.199, A:W.206
CHT.12: 5 residues within 4Å:- Chain A: N.181, W.186, Y.194, S.212, Y.214
2 PLIP interactions:2 interactions with chain A- pi-Cation interactions: A:W.186, A:W.186
CHT.20: 5 residues within 4Å:- Chain B: W.220, W.228, Y.249, M.257, E.275
4 PLIP interactions:4 interactions with chain B- pi-Cation interactions: B:W.220, B:W.220, B:W.228, B:W.228
CHT.21: 4 residues within 4Å:- Chain B: W.241, W.248, Y.264, Y.269
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:Y.264
- pi-Cation interactions: B:W.241, B:W.241, B:W.248, B:W.248, B:Y.264
CHT.22: 5 residues within 4Å:- Chain A: D.312
- Chain B: W.261, W.268, Y.293, L.301
5 PLIP interactions:5 interactions with chain B- pi-Cation interactions: B:W.261, B:W.261, B:W.268, B:W.268, B:Y.293
CHT.23: 5 residues within 4Å:- Chain B: F.199, W.206, Y.229, M.237, E.254
2 PLIP interactions:2 interactions with chain B- pi-Cation interactions: B:F.199, B:W.206
CHT.24: 5 residues within 4Å:- Chain B: N.181, W.186, Y.194, S.212, Y.214
2 PLIP interactions:2 interactions with chain B- pi-Cation interactions: B:W.186, B:W.186
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, Q. et al., Full-length structure of the major autolysin LytA. Acta Crystallogr.,Sect.D (2015)
- Release Date
- 2015-05-27
- Peptides
- Autolysin: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 12 x GOL: GLYCEROL(Non-functional Binders)
- 2 x ZN: ZINC ION(Non-covalent)
- 10 x CHT: CHOLINE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Li, Q. et al., Full-length structure of the major autolysin LytA. Acta Crystallogr.,Sect.D (2015)
- Release Date
- 2015-05-27
- Peptides
- Autolysin: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A