SMTL ID : 4x3m.1

Crystal Structure of TTHA0275 from Thermus thermophilus (HB8) in complex with Adenosine in space group P212121

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

2 x ADN: ADENOSINE(Non-covalent)

ADN.1: 13 residues within 4Å: Chain A: A.186, T.187, P.188, L.207, G.208, E.210, R.227, I.228, M.230, S.236, L.237, V.239, T.242 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.208, A:G.208, A:E.210, A:I.228, A:I.228, A:L.237, A:T.242 Water bridges: A:M.230 ADN.2: 13 residues within 4Å: Chain B: A.186, T.187, P.188, L.207, G.208, V.226, R.227, I.228, M.230, S.236, L.237, V.239, T.242 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:G.208, B:G.208, B:I.228, B:I.228, B:L.237, B:T.242 Water bridges: B:L.214, B:L.214, B:M.230, B:S.236, B:L.237, B:V.239

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 1 residues within 4Å: Chain B: R.220 3 PLIP interactions: 3 interactions with chain B Water bridges: B:R.220, B:R.221 Salt bridges: B:R.220

1 x K: POTASSIUM ION(Non-covalent)

K.4: 2 residues within 4Å: Chain B: E.24, R.25 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.24, B:R.25, H2O.14

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Demirci, H. et al., Crystal Structure of TTHA0275 from Thermus thermophilus (HB8). To Be Published

Release Date

2015-11-11

Peptides

RNA 2'-O ribose methyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

RNA 2'-O ribose methyltransferase

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