- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.59 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
- 4 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
DMS.2: 8 residues within 4Å:- Chain A: D.68, Y.69, A.76, W.107, V.161, L.163
- Ligands: SAH.1, MVI.5
2 PLIP interactions:2 interactions with chain A- pi-Cation interactions: A:W.107, A:W.107
DMS.3: 4 residues within 4Å:- Chain A: H.155, Q.156, N.158, A.159
1 PLIP interactions:1 interactions with chain A- Water bridges: A:A.159
DMS.7: 7 residues within 4Å:- Chain B: Y.69, A.76, W.107, V.161, L.163
- Ligands: SAH.6, MVI.10
1 PLIP interactions:1 interactions with chain B- pi-Cation interactions: B:W.107
DMS.8: 6 residues within 4Å:- Chain A: N.40, Y.43, D.45
- Chain B: N.40, Y.43, V.72
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:N.40, A:N.40
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.4: 5 residues within 4Å:- Chain A: D.209, D.211, D.236, D.237
- Ligands: MVI.5
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:D.209, A:D.236, A:D.237, H2O.6
MG.9: 5 residues within 4Å:- Chain B: D.209, D.211, D.236, D.237
- Ligands: MVI.10
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:D.209, B:D.236, B:D.237, H2O.18
- 2 x MVI: Mycinamicin VI(Non-covalent)
MVI.5: 16 residues within 4Å:- Chain A: A.50, G.51, Y.69, R.81, M.152, L.154, Y.157, D.209, D.211, D.236, D.237, C.239, P.241, Q.266
- Ligands: DMS.2, MG.4
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:A.50, A:L.154, A:Y.157, A:Y.157
- Hydrogen bonds: A:R.81, A:D.209, A:Q.266
- Water bridges: A:L.52, A:R.81
MVI.10: 18 residues within 4Å:- Chain B: A.50, G.51, Y.69, R.81, M.152, L.154, Y.157, D.209, D.211, D.236, D.237, C.239, I.240, P.241, Q.266
- Ligands: SAH.6, DMS.7, MG.9
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:A.50, B:L.154, B:Y.157, B:Y.157
- Hydrogen bonds: B:Y.69, B:R.81, B:D.209, B:Q.266
- Water bridges: B:L.52, B:R.81
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bernard, S.M. et al., Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases. Acs Chem.Biol. (2015)
- Release Date
- 2015-03-04
- Peptides
- Mycinamicin III 3''-O-methyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.59 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)
- 4 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x MVI: Mycinamicin VI(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Bernard, S.M. et al., Structural Basis of Substrate Specificity and Regiochemistry in the MycF/TylF Family of Sugar O-Methyltransferases. Acs Chem.Biol. (2015)
- Release Date
- 2015-03-04
- Peptides
- Mycinamicin III 3''-O-methyltransferase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B