SMTL ID : 4x9e.1

DEOXYGUANOSINETRIPHOSPHATE TRIPHOSPHOHYDROLASE from Escherichia coli with two DNA effector molecules

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-hexamer

Ligands

2 x C- C- C: RNA (5'-R(P*CP*CP*C)-3')(Non-covalent)

C-C-C.1: 20 residues within 4Å: Chain A: Y.16, R.17, R.30, E.33, S.34, G.37, R.38, N.41, R.198, M.199, N.200 Chain B: Q.75, Y.79, K.318, M.334, Y.335, R.337, V.338, L.341, N.342 Protein-ligand interaction information (PLIP) not available C-C-C.2: 19 residues within 4Å: Chain A: Q.75, Y.79, M.334, Y.335, R.337, V.338, L.341, N.342 Chain B: Y.16, R.17, R.30, E.33, S.34, G.37, R.38, N.41, R.198, M.199, N.200 Protein-ligand interaction information (PLIP) not available

2 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain A: H.69, H.117, D.118, D.268 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.69, A:H.117, A:D.268 MG.4: 4 residues within 4Å: Chain B: H.69, H.117, D.118, D.268 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.69, B:H.117, B:D.268

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Singh, D. et al., Structure of Escherichia coli dGTP Triphosphohydrolase: A HEXAMERIC ENZYME WITH DNA EFFECTOR MOLECULES. J.Biol.Chem. (2015)

Release Date

2015-02-25

Peptides

Deoxyguanosinetriphosphate triphosphohydrolase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Deoxyguanosinetriphosphate triphosphohydrolase

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