SMTL ID : 4x9j.1

EGR-1 with Doubly Methylated DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.41 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.6, V.8, C.11, R.13, H.24, H.28 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.6, A:C.11, A:H.24, A:H.28 ZN.2: 5 residues within 4Å: Chain A: C.36, I.38, C.39, H.52, H.56 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.36, A:C.39, A:H.52, A:H.56 ZN.3: 6 residues within 4Å: Chain A: C.64, I.66, C.67, R.69, H.80, H.84 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.64, A:C.67, A:H.80, A:H.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zandarashvili, L. et al., Structural impact of complete CpG methylation within target DNA on specific complex formation of the inducible transcription factor Egr-1. Febs Lett. (2015)

Release Date

2015-05-13

Peptides

Early growth response protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Early growth response protein 1