SMTL ID : 4xar.1

mGluR2 ECD and mGluR3 ECD complex with ligands

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

homo-dimer

Ligands

2 x 40F: (1S,2S,5R,6S)-2-aminobicyclo[3.1.0]hexane-2,6-dicarboxylic acid(Non-covalent)

40F.1: 12 residues within 4Å: Chain A: R.66, R.70, S.151, Y.152, S.153, A.174, S.175, T.176, Y.224, D.303, G.304, K.391 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.152, A:Y.224 Hydrogen bonds: A:S.153, A:A.174, A:T.176 Salt bridges: A:R.66, A:R.70, A:K.391 40F.10: 12 residues within 4Å: Chain B: R.66, R.70, S.151, Y.152, S.153, A.174, S.175, T.176, Y.224, D.303, G.304, K.391 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:Y.152, B:Y.224 Hydrogen bonds: B:S.153, B:A.174, B:T.176 Salt bridges: B:R.66, B:R.70, B:K.391

16 x IOD: IODIDE ION(Non-functional Binders)

IOD.2: 3 residues within 4Å: Chain A: S.154, Y.224, R.279 Ligand excluded by PLIP IOD.3: 2 residues within 4Å: Chain A: Q.69, K.360 Ligand excluded by PLIP IOD.4: 5 residues within 4Å: Chain A: P.48, T.100, S.151, Y.152, V.155 Ligand excluded by PLIP IOD.5: 3 residues within 4Å: Chain A: C.414, P.415, N.416 Ligand excluded by PLIP IOD.6: 3 residues within 4Å: Chain A: H.404, K.439, I.440 Ligand excluded by PLIP IOD.7: 3 residues within 4Å: Chain A: R.333, Q.334, R.337 Ligand excluded by PLIP IOD.8: 2 residues within 4Å: Chain A: Y.345, R.354 Ligand excluded by PLIP IOD.9: 1 residues within 4Å: Chain A: Y.345 Ligand excluded by PLIP IOD.11: 3 residues within 4Å: Chain B: S.154, Y.224, R.279 Ligand excluded by PLIP IOD.12: 2 residues within 4Å: Chain B: Q.69, K.360 Ligand excluded by PLIP IOD.13: 5 residues within 4Å: Chain B: P.48, T.100, S.151, Y.152, V.155 Ligand excluded by PLIP IOD.14: 3 residues within 4Å: Chain B: C.414, P.415, N.416 Ligand excluded by PLIP IOD.15: 3 residues within 4Å: Chain B: H.404, K.439, I.440 Ligand excluded by PLIP IOD.16: 3 residues within 4Å: Chain B: R.333, Q.334, R.337 Ligand excluded by PLIP IOD.17: 2 residues within 4Å: Chain B: Y.345, R.354 Ligand excluded by PLIP IOD.18: 1 residues within 4Å: Chain B: Y.345 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Monn, J.A. et al., Synthesis and Pharmacological Characterization of C4-Disubstituted Analogs of 1S,2S,5R,6S-2-Aminobicyclo[3.1.0]hexane-2,6-dicarboxylate: Identification of a Potent, Selective Metabotropic Glutamate Receptor Agonist and Determination of Agonist-Bound Human mGlu2 and mGlu3 Amino Terminal Domain Structures. J.Med.Chem. (2015)

Release Date

2015-02-11

Peptides

Metabotropic glutamate receptor 3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Metabotropic glutamate receptor 3

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