SMTL ID : 4xh0.1

Structure of C. glabrata Hrr25 bound to ADP (SO4 condition)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 10 residues within 4Å: Chain A: I.15, I.23, A.36, R.38, I.82, D.83, L.84, L.85, L.135, I.148 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.83, A:L.85 Water bridges: A:R.38, A:R.38, A:S.88, A:D.91, A:D.149 Salt bridges: A:R.38

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: Y.51, R.54 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.54 SO4.3: 4 residues within 4Å: Chain A: R.127, K.154, K.171, E.189 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.127, A:K.154, A:K.171 Salt bridges: A:R.127, A:K.154, A:K.171 SO4.4: 4 residues within 4Å: Chain A: R.178, Q.214, G.215, K.224 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:G.215 Water bridges: A:R.178, A:R.178, A:W.213, A:Q.214, A:Q.214, A:K.224, A:K.224, A:K.224, A:K.224, A:K.224 Salt bridges: A:R.178, A:K.224 SO4.5: 4 residues within 4Å: Chain A: R.157, H.162, R.192, R.263 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.192 Salt bridges: A:R.157, A:R.192, A:R.263 SO4.6: 4 residues within 4Å: Chain A: G.62, V.63, G.64, R.141 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.62, A:G.64 Water bridges: A:R.141, A:R.141 Salt bridges: A:R.141 SO4.7: 1 residues within 4Å: Chain A: R.73 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, Q. et al., Structure of the Saccharomyces cerevisiae Hrr25:Mam1 monopolin subcomplex reveals a novel kinase regulator. Embo J. (2016)

Release Date

2016-01-06

Peptides

Similar to uniprot|P29295 Saccharomyces cerevisiae YPL204w HRR25: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Similar to uniprot|P29295 Saccharomyces cerevisiae YPL204w HRR25

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