SMTL ID : 4xhl.1

Structure of S. cerevisiae Hrr25 1-394 (K38R mutant)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.01 Å

Oligo State

monomer

Ligands

1 x CKI: N-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE(Non-covalent)

CKI.1: 13 residues within 4Å: Chain A: I.15, I.23, A.36, Y.56, D.83, L.84, L.85, G.86, P.87, S.88, D.91, L.135, I.148 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.23, A:L.135, A:I.148 Hydrogen bonds: A:L.85, A:S.88, A:D.91, A:D.91 Halogen bonds: A:Y.56

7 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: R.178, Q.214, G.215, K.224 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.215 Salt bridges: A:R.178, A:K.224 SO4.3: 3 residues within 4Å: Chain A: R.127, K.154, K.171 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.127, A:K.154, A:K.171 SO4.4: 4 residues within 4Å: Chain A: L.110, Q.111, C.114, R.115 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.111 Salt bridges: A:R.115 SO4.5: 3 residues within 4Å: Chain A: R.271, L.272, D.275 No protein-ligand interaction detected (PLIP) SO4.6: 4 residues within 4Å: Chain A: L.110, L.267, A.270, K.274 No protein-ligand interaction detected (PLIP) SO4.7: 1 residues within 4Å: Chain A: H.347 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:H.347 SO4.8: 3 residues within 4Å: Chain A: R.157, H.162, R.192 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.157, A:R.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, Q. et al., Structure of the Saccharomyces cerevisiae Hrr25:Mam1 monopolin subcomplex reveals a novel kinase regulator. Embo J. (2016)

Release Date

2016-01-06

Peptides

Casein kinase I homolog HRR25: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Casein kinase I homolog HRR25