SMTL ID : 4xjt.1

Human CD38 complexed with inhibitor 2 [4-[(2,6-dimethylbenzyl)amino]-2-methylquinoline-8-carboxamide]

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x 41Z: 4-[(2,6-dimethylbenzyl)amino]-2-methylquinoline-8-carboxamide(Non-covalent)

41Z.1: 13 residues within 4Å: Chain A: W.87, K.91, E.108, D.117, V.147, S.148, W.151, K.152, S.182, T.183, S.186, V.187 Ligands: NA7.2 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:W.87, A:V.147, A:W.151, A:K.152, A:T.183, A:V.187 Hydrogen bonds: A:E.108, A:D.117, A:D.117, A:D.118, A:T.183, A:T.183 pi-Stacking: A:W.151, A:W.151, A:W.151

1 x NA7: [(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY-4-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4S)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE(Covalent)

NA7.2: 13 residues within 4Å: Chain A: L.86, W.87, S.88, R.89, L.107, W.138, S.155, D.181, S.182, T.183, F.184, Q.188 Ligands: 41Z.1 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:W.87, A:W.87, A:S.88, A:R.89, A:W.138, A:S.155, A:T.183, A:T.183, A:F.184 Water bridges: A:W.87, A:L.107 pi-Stacking: A:W.138, A:W.138, A:W.138

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Becherer, J.D. et al., Discovery of 4-Amino-8-quinoline Carboxamides as Novel, Submicromolar Inhibitors of NAD-Hydrolyzing Enzyme CD38. J.Med.Chem. (2015)

Release Date

2015-08-26

Peptides

ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1